Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm5187-201ENSMUST00000117317 991 ntBASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm11637-201ENSMUST00000120601 592 ntBASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm42693-201ENSMUST00000196779 631 ntBASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Lsm7Q9CQQ8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Gm16479-201ENSMUST00000121706 932 ntBASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Gm28693-202ENSMUST00000190758 331 ntBASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Lsm7Q9CQQ8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Lsm7Q9CQQ8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms