Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.82□□□□□ -0.36
Rnf111Q99ML9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rnf111Q99ML9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Gm28760-201ENSMUST00000185995 736 ntBASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Gm44855-201ENSMUST00000205725 362 ntBASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf111Q99ML9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.8□□□□□ -0.36
Rnf111Q99ML9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Mir6977-201ENSMUST00000184960 64 ntBASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Gm19891-201ENSMUST00000189771 303 ntBASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rnf111Q99ML9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rnf111Q99ML9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms