Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.84■□□□□ 0.29
Usp16Q99LG0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.84■□□□□ 0.29
Usp16Q99LG0 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp16Q99LG0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp16Q99LG0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.83■□□□□ 0.28
Usp16Q99LG0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Snora78-201ENSMUST00000158630 128 ntBASIC16.83■□□□□ 0.28
Usp16Q99LG0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.83■□□□□ 0.28
Usp16Q99LG0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.83■□□□□ 0.28
Usp16Q99LG0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Usp16Q99LG0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm26927-201ENSMUST00000182385 965 ntBASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm37424-201ENSMUST00000191727 561 ntBASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC16.82■□□□□ 0.28
Usp16Q99LG0 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.82■□□□□ 0.28
Usp16Q99LG0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.82■□□□□ 0.28
Usp16Q99LG0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.82■□□□□ 0.28
Usp16Q99LG0 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.82■□□□□ 0.28
Usp16Q99LG0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp16Q99LG0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.81■□□□□ 0.28
Usp16Q99LG0 Gm43438-201ENSMUST00000198133 379 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms