Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Gm13369-201ENSMUST00000119442 987 ntBASIC12.74□□□□□ -0.37
Rab28Q99KL7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.74□□□□□ -0.37
Rab28Q99KL7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Gm28693-202ENSMUST00000190758 331 ntBASIC12.74□□□□□ -0.37
Rab28Q99KL7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.74□□□□□ -0.37
Rab28Q99KL7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.74□□□□□ -0.37
Rab28Q99KL7 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rab28Q99KL7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.73□□□□□ -0.37
Rab28Q99KL7 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.73□□□□□ -0.37
Rab28Q99KL7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.73□□□□□ -0.37
Rab28Q99KL7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rab28Q99KL7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.72□□□□□ -0.37
Rab28Q99KL7 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.72□□□□□ -0.37
Rab28Q99KL7 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.72□□□□□ -0.37
Rab28Q99KL7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.72□□□□□ -0.37
Rab28Q99KL7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rab28Q99KL7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms