Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cts7-204ENSMUST00000225321 1257 ntBASIC15.25■□□□□ 0.03
Smc1bQ920F6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smc1bQ920F6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.24■□□□□ 0.03
Smc1bQ920F6 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.24■□□□□ 0.03
Smc1bQ920F6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smc1bQ920F6 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.23■□□□□ 0.03
Smc1bQ920F6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.23■□□□□ 0.03
Smc1bQ920F6 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gm12203-201ENSMUST00000118235 598 ntBASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gm12209-201ENSMUST00000120089 596 ntBASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gm11793-201ENSMUST00000120433 981 ntBASIC15.23■□□□□ 0.03
Smc1bQ920F6 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gm43133-201ENSMUST00000197472 463 ntBASIC15.23■□□□□ 0.03
Smc1bQ920F6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.23■□□□□ 0.03
Smc1bQ920F6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smc1bQ920F6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.22■□□□□ 0.03
Smc1bQ920F6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smc1bQ920F6 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms