Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb1Q91Y08 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Gm6152-201ENSMUST00000151704 340 ntBASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdhb1Q91Y08 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Gm12928-201ENSMUST00000117115 573 ntBASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Gm28911-201ENSMUST00000188837 117 ntBASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pcdhb1Q91Y08 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pcdhb1Q91Y08 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gm14350-201ENSMUST00000116642 640 ntBASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb1Q91Y08 Gm11978-201ENSMUST00000122315 466 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms