Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Gm17330-201ENSMUST00000221047 165 ntBASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb4Q91XZ6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb4Q91XZ6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Pcdhb4Q91XZ6 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pcdhb4Q91XZ6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Matn2-203ENSMUST00000226766 3252 ntBASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Gm9797-201ENSMUST00000052902 613 ntBASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb4Q91XZ6 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Gm14719-201ENSMUST00000121891 340 ntBASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb4Q91XZ6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms