Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhb5Q91XZ5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhb5Q91XZ5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Snord83b-201ENSMUST00000104546 94 ntBASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Gm22121-201ENSMUST00000175148 54 ntBASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhb5Q91XZ5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdhb5Q91XZ5 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhb5Q91XZ5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms