Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhga3Q91XY5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm5354-201ENSMUST00000182417 973 ntBASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm42612-201ENSMUST00000197986 623 ntBASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm43170-201ENSMUST00000199827 612 ntBASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhga3Q91XY5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm12485-201ENSMUST00000119641 291 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm43094-201ENSMUST00000196549 921 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm44855-201ENSMUST00000205725 362 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm17330-201ENSMUST00000221047 165 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm19220-201ENSMUST00000222682 803 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm24447-201ENSMUST00000083977 338 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pcdhga3Q91XY5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms