Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm22902-201ENSMUST00000158488 302 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm16379-201ENSMUST00000161469 348 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm20482-202ENSMUST00000174729 825 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm8762-201ENSMUST00000193486 339 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Rps4l-202ENSMUST00000204242 789 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga6Q91XY2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm22323-201ENSMUST00000103832 109 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm24255-201ENSMUST00000104481 128 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm25927-201ENSMUST00000175058 117 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm10608-202ENSMUST00000213924 676 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.17□□□□□ -0.3
Pcdhga6Q91XY2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Mir686-201ENSMUST00000102174 109 ntBASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Gm13786-201ENSMUST00000122371 333 ntBASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhga6Q91XY2 Gm2991-201ENSMUST00000173338 480 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms