Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx41Q91VN6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Gm5687-201ENSMUST00000118252 640 ntBASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Gm11803-201ENSMUST00000119966 444 ntBASIC15.16■□□□□ 0.02
Ddx41Q91VN6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Gm6152-201ENSMUST00000151704 340 ntBASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Gm24644-201ENSMUST00000157114 139 ntBASIC15.16■□□□□ 0.02
Ddx41Q91VN6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ddx41Q91VN6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Gm15770-201ENSMUST00000117498 584 ntBASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Snora78-201ENSMUST00000158630 128 ntBASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ddx41Q91VN6 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Gm22331-201ENSMUST00000158066 136 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms