Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Gm24934-201ENSMUST00000103764 111 ntBASIC15.28■□□□□ 0.04
StrcQ8VIM6 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Gm23085-201ENSMUST00000157849 293 ntBASIC15.28■□□□□ 0.04
StrcQ8VIM6 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.28■□□□□ 0.04
StrcQ8VIM6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.28■□□□□ 0.04
StrcQ8VIM6 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Gm3332-201ENSMUST00000189337 928 ntBASIC15.28■□□□□ 0.04
StrcQ8VIM6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC15.28■□□□□ 0.04
StrcQ8VIM6 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
StrcQ8VIM6 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.28■□□□□ 0.04
StrcQ8VIM6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Gm5733-201ENSMUST00000190232 939 ntBASIC15.27■□□□□ 0.04
StrcQ8VIM6 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Gm3028-201ENSMUST00000213805 1119 ntBASIC15.27■□□□□ 0.04
StrcQ8VIM6 Gm2517-201ENSMUST00000215651 348 ntBASIC15.27■□□□□ 0.04
StrcQ8VIM6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
StrcQ8VIM6 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.27■□□□□ 0.03
StrcQ8VIM6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.27■□□□□ 0.03
StrcQ8VIM6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Gm17831-201ENSMUST00000205579 900 ntBASIC15.27■□□□□ 0.03
StrcQ8VIM6 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
StrcQ8VIM6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC15.27■□□□□ 0.03
StrcQ8VIM6 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
StrcQ8VIM6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.26■□□□□ 0.03
StrcQ8VIM6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Gm13047-201ENSMUST00000117116 815 ntBASIC15.26■□□□□ 0.03
StrcQ8VIM6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC15.26■□□□□ 0.03
StrcQ8VIM6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
StrcQ8VIM6 Gm13142-201ENSMUST00000117213 1453 ntBASIC15.25■□□□□ 0.03
StrcQ8VIM6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
StrcQ8VIM6 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms