Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pcdh18Q8VHR0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Mir1897-201ENSMUST00000122581 272 ntBASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Pcdh18Q8VHR0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh18Q8VHR0 Gm33320-201ENSMUST00000192232 530 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms