Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rpa1Q8VEE4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Mir1895-201ENSMUST00000122615 79 ntBASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rpa1Q8VEE4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm11745-201ENSMUST00000121669 448 ntBASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Rprl2-201ENSMUST00000157150 290 ntBASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm27494-201ENSMUST00000184735 189 ntBASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm18766-201ENSMUST00000189811 808 ntBASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm33320-201ENSMUST00000192232 530 ntBASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms