Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Clrn1Q8K445 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.46□□□□□ -0.41
Clrn1Q8K445 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.46□□□□□ -0.41
Clrn1Q8K445 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn1Q8K445 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.46□□□□□ -0.41
Clrn1Q8K445 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.46□□□□□ -0.41
Clrn1Q8K445 Itm2b-204ENSMUST00000228637 783 ntBASIC12.46□□□□□ -0.41
Clrn1Q8K445 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Clrn1Q8K445 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Clrn1Q8K445 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.46□□□□□ -0.42
Clrn1Q8K445 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Clrn1Q8K445 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.45□□□□□ -0.42
Clrn1Q8K445 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Gm12928-201ENSMUST00000117115 573 ntBASIC12.45□□□□□ -0.42
Clrn1Q8K445 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.45□□□□□ -0.42
Clrn1Q8K445 Gm45384-201ENSMUST00000210451 277 ntBASIC12.45□□□□□ -0.42
Clrn1Q8K445 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.45□□□□□ -0.42
Clrn1Q8K445 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.45□□□□□ -0.42
Clrn1Q8K445 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Clrn1Q8K445 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.44□□□□□ -0.42
Clrn1Q8K445 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Gm2495-201ENSMUST00000191160 466 ntBASIC12.44□□□□□ -0.42
Clrn1Q8K445 Gm9794-201ENSMUST00000202370 423 ntBASIC12.44□□□□□ -0.42
Clrn1Q8K445 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.44□□□□□ -0.42
Clrn1Q8K445 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms