Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Gm12928-201ENSMUST00000117115 573 ntBASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfwd3Q8CIK8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm5687-201ENSMUST00000118252 640 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm7653-201ENSMUST00000214567 508 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm26315-201ENSMUST00000083890 321 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfwd3Q8CIK8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms