Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gm8385-201ENSMUST00000058999 643 ntBASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gm22058-201ENSMUST00000083393 310 ntBASIC14.86□□□□□ -0.03
Syne4Q8CII8 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.86□□□□□ -0.03
Syne4Q8CII8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Syne4Q8CII8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.85□□□□□ -0.03
Syne4Q8CII8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gm25732-201ENSMUST00000175168 60 ntBASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gm25700-201ENSMUST00000177693 110 ntBASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gm5523-201ENSMUST00000180415 997 ntBASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.85□□□□□ -0.03
Syne4Q8CII8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.85□□□□□ -0.03
Syne4Q8CII8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Daam2-202ENSMUST00000224595 1926 ntBASIC14.85□□□□□ -0.03
Syne4Q8CII8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Syne4Q8CII8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.84□□□□□ -0.03
Syne4Q8CII8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm9083-201ENSMUST00000120423 819 ntBASIC14.84□□□□□ -0.03
Syne4Q8CII8 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm43378-201ENSMUST00000199336 582 ntBASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm8099-201ENSMUST00000200510 742 ntBASIC14.84□□□□□ -0.03
Syne4Q8CII8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm29787-201ENSMUST00000222129 849 ntBASIC14.84□□□□□ -0.03
Syne4Q8CII8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.84□□□□□ -0.03
Syne4Q8CII8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Syne4Q8CII8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Syne4Q8CII8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Syne4Q8CII8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Syne4Q8CII8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Syne4Q8CII8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Syne4Q8CII8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Syne4Q8CII8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Syne4Q8CII8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Gm11331-201ENSMUST00000119764 288 ntBASIC14.83□□□□□ -0.04
Syne4Q8CII8 Gm13492-201ENSMUST00000119772 665 ntBASIC14.83□□□□□ -0.04
Syne4Q8CII8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms