Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gm6023-201ENSMUST00000118217 606 ntBASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gm22121-201ENSMUST00000175148 54 ntBASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gm44772-201ENSMUST00000207623 1191 ntBASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gm7172-201ENSMUST00000218047 1152 ntBASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rab11fip3Q8CHD8 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Gm12241-201ENSMUST00000118330 726 ntBASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Gm9368-201ENSMUST00000219348 831 ntBASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Gm45930-201ENSMUST00000221330 292 ntBASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rab11fip3Q8CHD8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab11fip3Q8CHD8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC17.02■□□□□ 0.31
Rab11fip3Q8CHD8 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab11fip3Q8CHD8 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rab11fip3Q8CHD8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Gm14723-201ENSMUST00000118686 215 ntBASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rab11fip3Q8CHD8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rab11fip3Q8CHD8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms