Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rdh1Q8CGV4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rdh1Q8CGV4 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Mir7221-201ENSMUST00000184009 72 ntBASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gm19309-201ENSMUST00000218295 205 ntBASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rdh1Q8CGV4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gm25261-201ENSMUST00000157416 134 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gm6222-202ENSMUST00000182143 629 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Mir6420-201ENSMUST00000185032 102 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gm37042-201ENSMUST00000193816 581 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gm43133-201ENSMUST00000197472 463 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Rdh1Q8CGV4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.78□□□□□ -0.36
Rdh1Q8CGV4 Acot6-202ENSMUST00000222921 3622 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms