Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gm5051-201ENSMUST00000204085 485 ntBASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gm9004-201ENSMUST00000218739 1222 ntBASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rtp1Q8C8C1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm8566-201ENSMUST00000120174 465 ntBASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm13813-201ENSMUST00000120998 787 ntBASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm44545-201ENSMUST00000208262 746 ntBASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rtp1Q8C8C1 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Gm45770-201ENSMUST00000212105 616 ntBASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rtp1Q8C8C1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rtp1Q8C8C1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms