Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a6Q8C6K9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a6Q8C6K9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col6a6Q8C6K9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gm23200-201ENSMUST00000104379 132 ntBASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.89□□□□□ -0.51
Col6a6Q8C6K9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a6Q8C6K9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.87□□□□□ -0.51
Col6a6Q8C6K9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms