Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm38266-201ENSMUST00000194931 421 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm4768-201ENSMUST00000206199 686 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm18935-201ENSMUST00000212692 664 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.37□□□□□ -0.27
Sh3rf2Q8BZT2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Gm43822-201ENSMUST00000200285 476 ntBASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Sh3rf2Q8BZT2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm7809-201ENSMUST00000153199 742 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Olfr284-202ENSMUST00000206647 966 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sh3rf2Q8BZT2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms