Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Ube3dQ8BX13 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.75□□□□□ -0.53
Ube3dQ8BX13 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ube3dQ8BX13 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms