Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fam43aQ8BUP8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Fam43aQ8BUP8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Fam43aQ8BUP8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Fam43aQ8BUP8 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm14767-201ENSMUST00000121559 586 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Auts2-212ENSMUST00000178555 309 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm27680-201ENSMUST00000184192 160 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm20949-201ENSMUST00000206478 952 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm7775-201ENSMUST00000218871 853 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.8□□□□□ -0.04
Fam43aQ8BUP8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Fam43aQ8BUP8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Gm27989-201ENSMUST00000184721 107 ntBASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Fam43aQ8BUP8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms