Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Gm44069-201ENSMUST00000204898 506 ntBASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.37□□□□□ -0.27
Usp43Q8BUM9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.37□□□□□ -0.27
Usp43Q8BUM9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Gm13612-201ENSMUST00000119276 390 ntBASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Gm7287-201ENSMUST00000205267 602 ntBASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Usp43Q8BUM9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm16202-201ENSMUST00000117532 544 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm12138-201ENSMUST00000122180 951 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm38671-201ENSMUST00000200573 130 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Usp43Q8BUM9 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.34□□□□□ -0.27
Usp43Q8BUM9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms