Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Gm26083-201ENSMUST00000157904 193 ntBASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rd3Q8BRE0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Mir877-201ENSMUST00000104738 85 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Gm15808-201ENSMUST00000119046 604 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Gm27320-201ENSMUST00000184892 109 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Gm6621-201ENSMUST00000193251 772 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Gm4768-201ENSMUST00000206199 686 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Rd3Q8BRE0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rd3Q8BRE0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rd3Q8BRE0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rd3Q8BRE0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.96□□□□□ -0.18
Rd3Q8BRE0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rd3Q8BRE0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rd3Q8BRE0 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.96□□□□□ -0.18
Rd3Q8BRE0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rd3Q8BRE0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm4986-201ENSMUST00000119731 549 ntBASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm13297-201ENSMUST00000120205 934 ntBASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm11637-201ENSMUST00000120601 592 ntBASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm14381-201ENSMUST00000122105 414 ntBASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Mospd4-201ENSMUST00000180618 576 ntBASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm28693-202ENSMUST00000190758 331 ntBASIC13.95□□□□□ -0.18
Rd3Q8BRE0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms