Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col16a1Q8BLX7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm12314-201ENSMUST00000118104 538 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm11667-201ENSMUST00000119828 486 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm14999-201ENSMUST00000121039 624 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm19353-201ENSMUST00000184561 445 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 AC166344.1-202ENSMUST00000224139 234 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Ntng1-201ENSMUST00000051253 327 ntBASIC16.98■□□□□ 0.31
Col16a1Q8BLX7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col16a1Q8BLX7 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Gm9062-201ENSMUST00000117712 727 ntBASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Gm15515-201ENSMUST00000117827 822 ntBASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col16a1Q8BLX7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col16a1Q8BLX7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Col16a1Q8BLX7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col16a1Q8BLX7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col16a1Q8BLX7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Gm5616-201ENSMUST00000165252 384 ntBASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.95■□□□□ 0.3
Col16a1Q8BLX7 Gm8741-201ENSMUST00000174736 384 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms