Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdhr3Q8BL00 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm23935-201ENSMUST00000102303 57 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm24270-201ENSMUST00000102326 57 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm24245-201ENSMUST00000157318 57 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm19931-201ENSMUST00000198920 368 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdhr3Q8BL00 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdhr3Q8BL00 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Gm12485-201ENSMUST00000119641 291 ntBASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms