Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Gm26461-201ENSMUST00000175064 290 ntBASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smarcal1Q8BJL0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smarcal1Q8BJL0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm8738-201ENSMUST00000172606 329 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm6082-201ENSMUST00000215204 454 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Mir433-201ENSMUST00000093564 124 ntBASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.02□□□□□ -0.17
Smarcal1Q8BJL0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Smarcal1Q8BJL0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms