Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smndc1Q8BGT7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smndc1Q8BGT7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Gm13015-201ENSMUST00000118674 204 ntBASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Gm5479-201ENSMUST00000160578 435 ntBASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Gm45098-201ENSMUST00000207179 657 ntBASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smndc1Q8BGT7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Smndc1Q8BGT7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smndc1Q8BGT7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smndc1Q8BGT7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
Smndc1Q8BGT7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.83□□□□□ -0.35
Smndc1Q8BGT7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smndc1Q8BGT7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smndc1Q8BGT7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Smndc1Q8BGT7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms