Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Map1b-203ENSMUST00000223725 2669 ntBASIC14.06□□□□□ -0.16
CtifQ6PEE2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CtifQ6PEE2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.05□□□□□ -0.16
CtifQ6PEE2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.05□□□□□ -0.16
CtifQ6PEE2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm23935-201ENSMUST00000102303 57 ntBASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm24270-201ENSMUST00000102326 57 ntBASIC14.05□□□□□ -0.16
CtifQ6PEE2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm24245-201ENSMUST00000157318 57 ntBASIC14.05□□□□□ -0.16
CtifQ6PEE2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm35960-201ENSMUST00000202712 767 ntBASIC14.05□□□□□ -0.16
CtifQ6PEE2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CtifQ6PEE2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Gm12350-201ENSMUST00000121208 462 ntBASIC14.04□□□□□ -0.16
CtifQ6PEE2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Gm5177-201ENSMUST00000183092 997 ntBASIC14.04□□□□□ -0.16
CtifQ6PEE2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Gm10060-201ENSMUST00000212002 111 ntBASIC14.04□□□□□ -0.16
CtifQ6PEE2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.04□□□□□ -0.16
CtifQ6PEE2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CtifQ6PEE2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.03□□□□□ -0.16
CtifQ6PEE2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.03□□□□□ -0.16
CtifQ6PEE2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CtifQ6PEE2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CtifQ6PEE2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms