Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Snord83b-201ENSMUST00000104546 94 ntBASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Gm7857-201ENSMUST00000117957 358 ntBASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.57□□□□□ -0.56
Snrnp40Q6PE01 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Gm13665-201ENSMUST00000120830 528 ntBASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Gm15547-201ENSMUST00000122152 333 ntBASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Gm27046-201ENSMUST00000182160 463 ntBASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Snrnp40Q6PE01 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms