Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcc2Q6PDG5 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.42■□□□□ 0.06
Smarcc2Q6PDG5 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.42■□□□□ 0.06
Smarcc2Q6PDG5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smarcc2Q6PDG5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Gm27892-201ENSMUST00000185017 106 ntBASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Gm8463-201ENSMUST00000208573 613 ntBASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smarcc2Q6PDG5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Mir1894-201ENSMUST00000122802 81 ntBASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Gm6244-201ENSMUST00000178732 841 ntBASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Gm44397-201ENSMUST00000195950 113 ntBASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Gm5035-201ENSMUST00000215581 927 ntBASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Gm26315-201ENSMUST00000083890 321 ntBASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smarcc2Q6PDG5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Smarcc2Q6PDG5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Gm6447-201ENSMUST00000118905 835 ntBASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smarcc2Q6PDG5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.38■□□□□ 0.05
Smarcc2Q6PDG5 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Smarcc2Q6PDG5 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smarcc2Q6PDG5 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms