Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm19931-201ENSMUST00000198920 368 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm5781-201ENSMUST00000219792 443 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Mir339-201ENSMUST00000083659 96 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Smchd1Q6P5D8 Daam2-202ENSMUST00000224595 1926 ntBASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm43822-201ENSMUST00000200285 476 ntBASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm18584-201ENSMUST00000203098 964 ntBASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smchd1Q6P5D8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms