Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tgfbr1Q64729 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gm15653-201ENSMUST00000119247 907 ntBASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tgfbr1Q64729 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Gm15770-201ENSMUST00000117498 584 ntBASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Gm38294-201ENSMUST00000192831 381 ntBASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Chchd1-203ENSMUST00000224633 557 ntBASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tgfbr1Q64729 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tgfbr1Q64729 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tgfbr1Q64729 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms