Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.22■□□□□ 0.03
Scn9aQ62205 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scn9aQ62205 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn9aQ62205 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn9aQ62205 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn9aQ62205 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.22■□□□□ 0.03
Scn9aQ62205 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scn9aQ62205 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn9aQ62205 Gm15515-201ENSMUST00000117827 822 ntBASIC15.22■□□□□ 0.03
Scn9aQ62205 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn9aQ62205 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn9aQ62205 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.22■□□□□ 0.03
Scn9aQ62205 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn9aQ62205 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn9aQ62205 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Scn9aQ62205 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Gm6039-201ENSMUST00000121667 1250 ntBASIC15.21■□□□□ 0.03
Scn9aQ62205 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Mir6546-201ENSMUST00000184460 62 ntBASIC15.21■□□□□ 0.03
Scn9aQ62205 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC15.21■□□□□ 0.03
Scn9aQ62205 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.21■□□□□ 0.03
Scn9aQ62205 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.21■□□□□ 0.03
Scn9aQ62205 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Scn9aQ62205 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Scn9aQ62205 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn9aQ62205 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn9aQ62205 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.21■□□□□ 0.02
Scn9aQ62205 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn9aQ62205 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn9aQ62205 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn9aQ62205 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn9aQ62205 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Scn9aQ62205 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn9aQ62205 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn9aQ62205 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm5616-201ENSMUST00000165252 384 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm8741-201ENSMUST00000174736 384 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm6992-201ENSMUST00000217973 1607 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.2■□□□□ 0.02
Scn9aQ62205 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Gm12165-201ENSMUST00000117047 342 ntBASIC15.2■□□□□ 0.02
Scn9aQ62205 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn9aQ62205 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms