Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Gm15573-201ENSMUST00000119487 540 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.07□□□□□ -0.48
VcanQ62059 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.07□□□□□ -0.48
VcanQ62059 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Gm10774-201ENSMUST00000188689 204 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Gm37201-201ENSMUST00000191845 523 ntBASIC12.07□□□□□ -0.48
VcanQ62059 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
VcanQ62059 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
VcanQ62059 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.06□□□□□ -0.48
VcanQ62059 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Gm13549-201ENSMUST00000118339 796 ntBASIC12.06□□□□□ -0.48
VcanQ62059 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Gm42657-201ENSMUST00000201746 211 ntBASIC12.06□□□□□ -0.48
VcanQ62059 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.06□□□□□ -0.48
VcanQ62059 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
VcanQ62059 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.06□□□□□ -0.48
VcanQ62059 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
VcanQ62059 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.06□□□□□ -0.48
VcanQ62059 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VcanQ62059 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Gm6447-201ENSMUST00000118905 835 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Gm6963-201ENSMUST00000147879 379 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.05□□□□□ -0.48
VcanQ62059 AY036118-201ENSMUST00000200021 923 ntBASIC12.05□□□□□ -0.48
VcanQ62059 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.05□□□□□ -0.48
VcanQ62059 Gm2517-201ENSMUST00000215651 348 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.05□□□□□ -0.48
VcanQ62059 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
VcanQ62059 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.05□□□□□ -0.48
VcanQ62059 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.05□□□□□ -0.48
VcanQ62059 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VcanQ62059 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms