Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.16□□□□□ -0.78
Notch3Q61982 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Gm45865-201ENSMUST00000211815 945 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Notch3Q61982 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Cog3-203ENSMUST00000227473 4197 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Notch3Q61982 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Notch3Q61982 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Notch3Q61982 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.16□□□□□ -0.78
Notch3Q61982 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Notch3Q61982 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.16□□□□□ -0.78
Notch3Q61982 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.16□□□□□ -0.78
Notch3Q61982 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC10.16□□□□□ -0.78
Notch3Q61982 Gm26927-201ENSMUST00000182385 965 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Gm43133-201ENSMUST00000197472 463 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Gm7783-201ENSMUST00000204795 781 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Gm5161-201ENSMUST00000075243 853 ntBASIC10.16□□□□□ -0.78
Notch3Q61982 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Notch3Q61982 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.15□□□□□ -0.78
Notch3Q61982 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.15□□□□□ -0.78
Notch3Q61982 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
Notch3Q61982 Gm15808-201ENSMUST00000119046 604 ntBASIC10.15□□□□□ -0.78
Notch3Q61982 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.15□□□□□ -0.78
Notch3Q61982 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Notch3Q61982 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Notch3Q61982 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Notch3Q61982 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Notch3Q61982 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Gm12846-201ENSMUST00000120431 1373 ntBASIC10.15□□□□□ -0.78
Notch3Q61982 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.15□□□□□ -0.78
Notch3Q61982 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Notch3Q61982 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.15□□□□□ -0.78
Notch3Q61982 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Notch3Q61982 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Notch3Q61982 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Notch3Q61982 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms