Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Gli3Q61602 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gli3Q61602 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Gm14921-201ENSMUST00000118643 908 ntBASIC17.3■□□□□ 0.36
Gli3Q61602 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC17.3■□□□□ 0.36
Gli3Q61602 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC17.3■□□□□ 0.36
Gli3Q61602 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Gm21092-201ENSMUST00000178995 955 ntBASIC17.3■□□□□ 0.36
Gli3Q61602 Gm29410-201ENSMUST00000188383 694 ntBASIC17.3■□□□□ 0.36
Gli3Q61602 AC153954.1-201ENSMUST00000216959 255 ntBASIC17.3■□□□□ 0.36
Gli3Q61602 Gm18636-201ENSMUST00000218846 1066 ntBASIC17.3■□□□□ 0.36
Gli3Q61602 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gli3Q61602 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gli3Q61602 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gli3Q61602 Gm9072-201ENSMUST00000218390 1514 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.29■□□□□ 0.36
Gli3Q61602 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Gm15352-201ENSMUST00000118696 270 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 Gm8737-201ENSMUST00000122208 642 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Gli3Q61602 Gm9116-201ENSMUST00000192400 1018 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 Ighv4-2-201ENSMUST00000192975 362 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gli3Q61602 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Gm37859-201ENSMUST00000195529 2173 ntBASIC17.29■□□□□ 0.36
Gli3Q61602 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gli3Q61602 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Gli3Q61602 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Gm11949-201ENSMUST00000117640 372 ntBASIC17.28■□□□□ 0.36
Gli3Q61602 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC17.28■□□□□ 0.36
Gli3Q61602 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC17.28■□□□□ 0.36
Gli3Q61602 Rprl1-201ENSMUST00000158050 327 ntBASIC17.28■□□□□ 0.36
Gli3Q61602 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC17.28■□□□□ 0.36
Gli3Q61602 AC165260.2-203ENSMUST00000224237 336 ntBASIC17.28■□□□□ 0.36
Gli3Q61602 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.28■□□□□ 0.36
Gli3Q61602 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC17.28■□□□□ 0.36
Gli3Q61602 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gli3Q61602 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gli3Q61602 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gli3Q61602 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.28■□□□□ 0.36
Gli3Q61602 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC17.28■□□□□ 0.36
Gli3Q61602 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC17.28■□□□□ 0.36
Gli3Q61602 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gli3Q61602 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC17.28■□□□□ 0.36
Gli3Q61602 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC17.28■□□□□ 0.36
Gli3Q61602 Ap3s1-202ENSMUST00000224622 978 ntBASIC17.28■□□□□ 0.36
Gli3Q61602 Lgi3-203ENSMUST00000226548 1001 ntBASIC17.28■□□□□ 0.36
Gli3Q61602 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.27■□□□□ 0.36
Gli3Q61602 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gli3Q61602 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gli3Q61602 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gli3Q61602 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gli3Q61602 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gli3Q61602 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.27■□□□□ 0.36
Gli3Q61602 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Gli3Q61602 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gli3Q61602 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Gli3Q61602 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.27■□□□□ 0.36
Gli3Q61602 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC17.27■□□□□ 0.36
Gli3Q61602 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gli3Q61602 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gli3Q61602 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC17.27■□□□□ 0.35
Gli3Q61602 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gli3Q61602 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC17.27■□□□□ 0.35
Gli3Q61602 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gli3Q61602 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms