Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm12990-201ENSMUST00000120372 468 ntBASIC12.7□□□□□ -0.38
Col12a1Q60847 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.7□□□□□ -0.38
Col12a1Q60847 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.7□□□□□ -0.38
Col12a1Q60847 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.69□□□□□ -0.38
Col12a1Q60847 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.69□□□□□ -0.38
Col12a1Q60847 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.69□□□□□ -0.38
Col12a1Q60847 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Gm5621-201ENSMUST00000187303 640 ntBASIC12.69□□□□□ -0.38
Col12a1Q60847 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.69□□□□□ -0.38
Col12a1Q60847 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col12a1Q60847 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.68□□□□□ -0.38
Col12a1Q60847 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Gm2517-201ENSMUST00000215651 348 ntBASIC12.68□□□□□ -0.38
Col12a1Q60847 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Gm17827-201ENSMUST00000211825 742 ntBASIC12.68□□□□□ -0.38
Col12a1Q60847 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.68□□□□□ -0.38
Col12a1Q60847 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Gm19994-201ENSMUST00000217086 586 ntBASIC12.68□□□□□ -0.38
Col12a1Q60847 Gm9139-201ENSMUST00000218817 700 ntBASIC12.68□□□□□ -0.38
Col12a1Q60847 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.68□□□□□ -0.38
Col12a1Q60847 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Col12a1Q60847 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Col12a1Q60847 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Col12a1Q60847 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Col12a1Q60847 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Col12a1Q60847 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms