Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm15240-201ENSMUST00000118156 720 ntBASIC12.61□□□□□ -0.39
Nr1h4Q60641 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm24513-201ENSMUST00000174964 138 ntBASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm17330-201ENSMUST00000221047 165 ntBASIC12.61□□□□□ -0.39
Nr1h4Q60641 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.61□□□□□ -0.39
Nr1h4Q60641 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.61□□□□□ -0.39
Nr1h4Q60641 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.61□□□□□ -0.39
Nr1h4Q60641 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.61□□□□□ -0.39
Nr1h4Q60641 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Gm27397-201ENSMUST00000184997 107 ntBASIC12.6□□□□□ -0.39
Nr1h4Q60641 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.6□□□□□ -0.39
Nr1h4Q60641 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nr1h4Q60641 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.59□□□□□ -0.39
Nr1h4Q60641 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.59□□□□□ -0.39
Nr1h4Q60641 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nr1h4Q60641 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms