Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Gm2231-201ENSMUST00000125661 612 ntBASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc88aQ5SNZ0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Gm11331-201ENSMUST00000119764 288 ntBASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Gm27023-201ENSMUST00000182372 285 ntBASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc88aQ5SNZ0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ccdc88aQ5SNZ0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm7467-201ENSMUST00000185173 652 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Morn2-202ENSMUST00000227729 656 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm8385-201ENSMUST00000058999 643 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Gm23200-201ENSMUST00000104379 132 ntBASIC15.01□□□□□ -0.01
Ccdc88aQ5SNZ0 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms