Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm12428-201ENSMUST00000119844 727 ntBASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm12260-201ENSMUST00000122447 411 ntBASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm19931-201ENSMUST00000198920 368 ntBASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm24543-201ENSMUST00000103867 82 ntBASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm10766-202ENSMUST00000194123 606 ntBASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.25□□□□□ -0.77
Trav15-1-dv6-1Q5R1D2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms