Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm27839-201ENSMUST00000184242 106 ntBASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Gm6091-201ENSMUST00000098307 165 ntBASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap2Q3V1H1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm11637-201ENSMUST00000120601 592 ntBASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm22331-201ENSMUST00000158066 136 ntBASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm27847-201ENSMUST00000183711 107 ntBASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm27375-201ENSMUST00000183799 107 ntBASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.11■□□□□ 0.01
Ckap2Q3V1H1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Gm4271-201ENSMUST00000174444 973 ntBASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Gm29127-201ENSMUST00000188304 517 ntBASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Gm6458-201ENSMUST00000211573 635 ntBASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.1■□□□□ 0.01
Ckap2Q3V1H1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap2Q3V1H1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms