Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gm14767-201ENSMUST00000121559 586 ntBASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Mir7023-201ENSMUST00000185093 64 ntBASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gm44344-201ENSMUST00000200287 129 ntBASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gm20949-201ENSMUST00000206478 952 ntBASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm27306-201ENSMUST00000183970 107 ntBASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 AC159246.1-201ENSMUST00000214478 249 ntBASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 AC154634.3-201ENSMUST00000224589 736 ntBASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Shisa3Q3UPR0 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms