Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Gm22323-201ENSMUST00000103832 109 ntBASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Gm13786-201ENSMUST00000122371 333 ntBASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc33Q3ULW6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Grk6-205ENSMUST00000224653 2976 ntBASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Rps4l-202ENSMUST00000204242 789 ntBASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm8227-201ENSMUST00000223306 571 ntBASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc33Q3ULW6 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm12176-201ENSMUST00000121420 875 ntBASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Nsd1-205ENSMUST00000224693 852 ntBASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm16372-201ENSMUST00000073088 450 ntBASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.81□□□□□ -0.04
Ccdc33Q3ULW6 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms