Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm7537-201ENSMUST00000221660 1414 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm12470-201ENSMUST00000117239 1049 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm5455-201ENSMUST00000058710 715 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm11509-201ENSMUST00000117358 325 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm33707-201ENSMUST00000195135 569 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Gm43249-201ENSMUST00000200464 458 ntBASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC6.78□□□□□ -1.32
Ush2AQ2QI47 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Ush2AQ2QI47 Efs-202ENSMUST00000227037 2540 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Mir432-201ENSMUST00000157230 75 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm38297-201ENSMUST00000195122 1057 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC118639.2-201ENSMUST00000226289 223 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm38103-201ENSMUST00000191707 864 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm3726-201ENSMUST00000203110 785 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC125209.1-201ENSMUST00000225812 766 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC169511.1-201ENSMUST00000227639 995 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm44152-201ENSMUST00000205007 1691 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC171277.1-201ENSMUST00000216902 1441 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC238811.4-201ENSMUST00000178019 1246 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC238940.3-201ENSMUST00000178830 1246 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 AC158392.3-201ENSMUST00000224271 1284 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Ush2AQ2QI47 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ush2AQ2QI47 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ush2AQ2QI47 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Ush2AQ2QI47 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ush2AQ2QI47 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ush2AQ2QI47 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms