Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col9a2Q07643 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.27□□□□□ -0.12
Col9a2Q07643 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Col9a2Q07643 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.27□□□□□ -0.12
Col9a2Q07643 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Col9a2Q07643 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.27□□□□□ -0.12
Col9a2Q07643 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col9a2Q07643 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Gm15370-201ENSMUST00000117158 253 ntBASIC14.27□□□□□ -0.13
Col9a2Q07643 Gm13350-201ENSMUST00000120519 479 ntBASIC14.27□□□□□ -0.13
Col9a2Q07643 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Gm8738-201ENSMUST00000172606 329 ntBASIC14.27□□□□□ -0.13
Col9a2Q07643 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Col9a2Q07643 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.27□□□□□ -0.13
Col9a2Q07643 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col9a2Q07643 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Col9a2Q07643 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm14704-201ENSMUST00000120300 874 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm26461-201ENSMUST00000175064 290 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm29396-201ENSMUST00000185659 716 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm6621-201ENSMUST00000193251 772 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm43822-201ENSMUST00000200285 476 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Gm4768-201ENSMUST00000206199 686 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.26□□□□□ -0.13
Col9a2Q07643 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.26□□□□□ -0.13
Col9a2Q07643 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col9a2Q07643 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col9a2Q07643 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms