Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col6a2Q02788 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col6a2Q02788 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Gm27572-201ENSMUST00000183702 255 ntBASIC13.17□□□□□ -0.3
Col6a2Q02788 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.17□□□□□ -0.3
Col6a2Q02788 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.17□□□□□ -0.3
Col6a2Q02788 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col6a2Q02788 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.16□□□□□ -0.3
Col6a2Q02788 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Mir686-201ENSMUST00000102174 109 ntBASIC13.16□□□□□ -0.3
Col6a2Q02788 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Col6a2Q02788 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.16□□□□□ -0.3
Col6a2Q02788 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a2Q02788 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a2Q02788 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col6a2Q02788 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a2Q02788 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.15□□□□□ -0.3
Col6a2Q02788 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a2Q02788 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a2Q02788 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms