Protein–RNA interactions for Protein: P97458

Prop1, Homeobox protein prophet of Pit-1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prop1P97458 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.07□□□□□ -0.64
Prop1P97458 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Mir874-201ENSMUST00000104769 76 ntBASIC11.07□□□□□ -0.64
Prop1P97458 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Prop1P97458 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.07□□□□□ -0.64
Prop1P97458 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.07□□□□□ -0.64
Prop1P97458 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.07□□□□□ -0.64
Prop1P97458 Gm17208-201ENSMUST00000168388 535 ntBASIC11.07□□□□□ -0.64
Prop1P97458 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.07□□□□□ -0.64
Prop1P97458 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Gm7399-201ENSMUST00000032395 858 ntBASIC11.07□□□□□ -0.64
Prop1P97458 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.07□□□□□ -0.64
Prop1P97458 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.07□□□□□ -0.64
Prop1P97458 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Prop1P97458 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Prop1P97458 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Prop1P97458 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Prop1P97458 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Prop1P97458 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Prop1P97458 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.06□□□□□ -0.64
Prop1P97458 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.06□□□□□ -0.64
Prop1P97458 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Snord83b-201ENSMUST00000104546 94 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Prop1P97458 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Prop1P97458 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Gm16379-201ENSMUST00000161469 348 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Gm8762-201ENSMUST00000193486 339 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Gm43118-201ENSMUST00000199149 775 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Gm6013-201ENSMUST00000212264 699 ntBASIC11.06□□□□□ -0.64
Prop1P97458 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.06□□□□□ -0.64
Prop1P97458 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.06□□□□□ -0.64
Prop1P97458 CT009764.1-201ENSMUST00000222260 483 ntBASIC11.06□□□□□ -0.64
Prop1P97458 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Prop1P97458 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Matn2-206ENSMUST00000228570 2798 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
Prop1P97458 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.06□□□□□ -0.64
Prop1P97458 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Prop1P97458 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Prop1P97458 Acot6-202ENSMUST00000222921 3622 ntBASIC11.05□□□□□ -0.64
Prop1P97458 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Prop1P97458 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Prop1P97458 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms